September 13, 2026 10:54 am

NBA Accreditation:UG-CSE,ETCE (6yrs) & UG-IT,IEE,PE (3yrs)

Joydeep Mukherjee

Department : School Of Environmental Studies

Designation : Professor

Additional Roles and Responsibilities :

  • Director, School of Environmental Studies (Oct 2023 to Oct 2025)
  • Dean (Interim) Faculty of Interdisciplinary Studies Law & Management (Aug 2024 to Jan 2025)

Address : School of Environmental Studies (Opposite University press) Jadavpur University Main Campus Jadavpur Kolkata 700032

E-Mail: joydeep.mukherjee@jadavpuruniversity.in

Office Phone Number: 03324572874

JoydeepMukherjee

About

Prof. Dr. Joydeep Mukherjee obtained his bachelors degree in Pharmaceutical Sciences from Birla Institute of Technology (Mesra, India) in 1990. He also possesses a masters degree in Biotechnology in 1992 and Ph.D. in the same area from Jadavpur University (Kolkata, India) in 1997. During his doctoral work Prof. Mukherjee was a German Academic Exchange Fellow in the University of Hannover, Germany and later a post doctoral fellow from 1998 to 2000 in the same university having fellowships of the German Research Foundation and the Daimler and Benz Foundation. Later he completed another post doctoral research stay at the Australian Institute of Marine Science, Townsville in 2007. Prof. Mukherjee joined Jadavpur University in 2000 and presently he holds a Professor position and is also the Director of the School of Environmental Studies of Jadavpur University. He held a special associate professorship position of the University Grants Commission tenable in the School of Environmental Studies of Jadavpur University from 2013 till 2020. Prof. Mukherjee is currently teaching Biochemical Engineering, Bioremediation and Biodiversity Conservation and Management to M. Tech. (Environmental Biotechnology) and M. Tech. (Environmental Science & Technology) students. He also launched the Advanced Diploma in Industrial Safety & Environmental Management course through which industry professionals can update their knowledge. His research interests include microbial diversity of the Sundarbans (the world’s largest tidal mangrove forest), biofilm formation, bioplastic production, marine sponge pathogenesis and recycling of rural slaughterhouse wastes. Prof. Mukherjee has research collaborations with Germany, Australia, Canada, Mexico and Brazil. He has published 100 international research papers and obtained three patents. Sixteen students have obtained their doctoral degrees under his supervision and placed in academic and scientific positions in India and abroad.

Subjects Taught

    Biochemical Engineering    Bioremediation    Environmental Health & Toxicology

Research Interests

    Exploration of the microbial diversity of the Sundarbans (the world’s largest tidal mangrove forest) for biotechnological applications. Focused areas: Actinobacteria of the Sundarbans, commercial enzymes from bacteria of the Sundarbans, cyanobacteria of the Sundarbans    Biofilm formation and novel reactor systems for the cultivation of intertidal microorganisms (in collaboration with TU Kaiserslautern, Germany)    Characterization of marine sponge pathogens (in collaboration with the Australian Institute of Marine Science, Australia)    Bioplastic production using halophilic microorganisms (in collaboration with IFB Agro Industries, Kolkata)    Bioconversion of rural slaughterhouse wastes to organic fertilizer

Notable Activities

    CURRICULUM DEVELOPMENT    Conversion of the three-semester M. Phil. Environmental Science course of Jadavpur University to a four-semester course, 2008    Introduction of the new one year PG diploma course on Environmental Management & Regulations, the first course offered by Jadavpur University in the newly acquired campus (from erstwhile National Instruments Limited) in November, 2010    Introduction of the new course, Master of Technology in Environmental Biotechnology offered by Jadavpur University from July, 2011    Introduction of the new 3-semester diploma course on Industrial Safety & Environmental Management, 2017    Introduction of the new course, Master of Technology in Environmental Science & Technology offered by Jadavpur University, 2024

Notable Achievements

    “Deutscher Akademischer Austauschdienst” (DAAD) fellowship from the Government of the Federal Republic of Germany, 1995-1996    Post Doctoral Fellowship under “Graduiertenkollegs : Chemische und technische Grundlagen der Naturstofftransformation”, financed by the “Deutsche Forschungsgemeinschaft” (DFG), 1998-1999    Fellowship of the “Gottlieb Daimler und Karl Benz Stiftung”, Ladenburg, Germany, 1996    Biotechnology Overseas Associateship of the Department of Biotechnology, Government of India, to undergo advanced training at the Australian Institute of Marine Science, Townsville, Australia from January 2007 to December 2007    Associate Professorship (Faculty Recharge Programme of the UGC) 2013-2020 tenable in Jadavpur University

Journal Papers Published

  SELECTED PUBLICATIONS Purification and characterization of a salt, solvent, detergent and bleach tolerant protease from a new gamma-Proteobacterium isolated from the marine environment of the Sundarbans: Barindra Sana, Debashish Ghosh, Malay Saha and Joydeep Mukherjee: Process Biochemistry 41, 208-215, 2006   Distribution of actinomycetes, their antagonistic behaviour and the physico-chemical characteristics of the world’s largest tidal mangrove forest: Mitra A, Santra SC, Mukherjee J: Applied Microbiology and Biotechnology, 80, 685-695, 2008   Streptomyces sundarbansensis sp. nov., a novel actinomycete that produces 2-allyloxyphenol: Meyyappan Arumugam, Anindita Mitra, Arnab Pramanik, Malay Saha, Ratan Gachhui and Joydeep Mukherjee: International Journal of Systematic and Evolutionary Microbiology, 61, 11, 2664-9, 2011   The pathogen of the Great Barrier Reef sponge Rhopaloeides odorabile is a new strain of Pseudoalteromonas agarivorans containing abundant and diverse virulence-related genes: Jayanta D. Choudhury, Arnab Pramanik, Nicole S. Webster, Lyndon E. Llewellyn, Ratan Gachhui, Joydeep Mukherjee: Marine Biotechnology, 17 (4), 463-478, 2015   Streptomyces euryhalinus sp. nov., a new actinomycete isolated from a mangrove forest: Kaushik Biswas, Jayanta Debabrata Choudhury, Riddhi Mahansaria, Malay Saha, Joydeep Mukherjee: Journal of Antibiotics (Nature Publishing Group), 70, 747-753, 2017   U32 collagenase from Pseudoalteromonas agarivorans NW4327: Activity, structure, substrate interactions and molecular dynamics simulations: Sayak Bhattacharya, Sourya Bhattacharya, Ratan Gachhui, Saugata Hazra, Joydeep Mukherjee: International Journal of Biological Macromolecules: 124, 635–650, 2019   Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest: Sandeep Chakraborty, Veerabadhran Maruthanayagam, Anushree Achari, Arnab Pramanik, Parasuraman Jaisankar, Joydeep Mukherjee: Phytotaxa, 522, 2021   Almyronema epifaneia gen. & sp. nov. (Cyanobacteria, Nodosilineaceae) isolated from an Indian mangrove forest: Arup Ratan Roy, Sandeep Chakraborty, Apala Karmakar, Sergio de los Santos-Villalobos, Joydeep Mukherjee: Phycologia, 63(1), 89–106, 2024 https://doi.org/10.1080/00318884.2023.2294414   Enhanced production of antimicrobial compounds by three salt-tolerant actinobacterial strains isolated from the Sundarbans in a niche-mimic bioreactor: Sreyashi Sarkar, Malay Saha, Parasuraman Jaisankar. Satadal Das, Debashish Roy, Lalita Gauri Roy, Ratan Gachhui, Tuhinadri Sen and Joydeep Mukherjee: Marine Biotechnology, 10, 518-526, 2008   Enhanced protease production in a polymethylmethacrylate conico-cylindrical flask by two biofilm-forming bacteria: Sreyashi Sarkar, Debashis Roy and Joydeep Mukherjee: Bioresource Technology, 102, 1849-1855, 2011   Enhanced biotransformation of fluoranthene by intertidally-derived Cunnighamella elegans through biofilm-based and niche-mimic cultivations: Sayani Mitra, Arnab Pramanik, Srijoni Banerjee, Saubhik Haldar, Ratan Gachhui, Joydeep Mukherjee: Applied and Environmental Microbiology, 79, 7922-7930, 2013   Monitoring of biofilms grown on differentially structured metallic surfaces using confocal laser scanning microscopy: Daniel Kleine, Jonas Chodorski, Sayani Mitra, Christin Schlegel, Katharina Huttenlochner, Christine Müller-Renno, Joydeep Mukherjee, Christiane Ziegler, Roland Ulber: Engineering in Life Sciences, 19, 513–521, 2019   Polycyclic aromatic hydrocarbon sequestration by intertidal phototrophic biofilms cultivated in hydrophobic and hydrophilic biofilm-promoting culture vessels: Saranya Balu, Shantanu Bhunia, Ratan Gachhui, Joydeep Mukherjee: Journal of Hazardous Materials 437, 129318, 2022   Biosorption of cadmium and cobalt by intertidal multicomponent biofilms: Ahana Dutta, Abhishek Mandal, Joydeep Mukherjee, Reshmi Das: Marine Pollution Bulletin, 185, 114318, 2022   Utilization of vinasse for production of poly-3-(hydroxybutyrate-co hydroxyvalerate) by Haloferax mediterranei: Anirban Bhattacharyya, Arnab Pramanik, Sudipta Kumar Maji, Saubhik Haldar, Ujjal Kumar Mukhopadhyay, Joydeep Mukherjee: AMB Express, 2, 34, 2012   Production enhancement and characterization of the polyhydroxyalkanoate produced by Natrinema ajinwuensis (as synonym) ≡ Natrinema altunense strain RM-G10: Riddhi Mahansaria, Anusua Dhara, Amit Saha, Saubhik Haldar, Joydeep Mukherjee: International Journal of Biological Macromolecules, 107 (Pt. B), 1480-1490, 2018   Production enhancement of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in Halogeometricum borinquense, characterization of the bioplastic and desalination of the bioreactor effluent: Riddhi Mahansaria, Sampa Bhowmik, Anusua Dhara, Amit Saha, Mrinal Kanti Mandal, Raja Ghosh, Joydeep Mukherjee: Process Biochemistry, 94, 243-257, 2020   Conversion of rural abattoir wastes to an organic fertilizer and its application in the field cultivation of tomato in India: Malancha Roy, Rimi Das, Anupam Debsarcar, Pradip Kumar Sen, Joydeep Mukherjee: Renewable Agriculture and Food Systems, 31 (4), 350-360, 2016   Development of a novel helical-ribbon mixer dryer for conversion of rural slaughterhouse wastes to an organic fertilizer and implications in the rural circular economy: Ankita Bhowmik, Shantanu Bhunia, Anupam Debsarkar, Rambilash Mallick, Malancha Roy, Joydeep Mukherjee: Sustainability 13, (16), 9455, 2021   Successive cultivation of cabbage and spinach by land application of recycled slaughterhouse waste: benefit to farmers and agro-ecosystem health: Shantanu Bhunia, Ankita Bhowmik, Arnab Pramanik, Rambilash Mallick, Joydeep Mukherjee: Environmental Technology and Innovation, 29, 102967, 2023   A tropical marine microbial natural products geobibliography as an example of desktop exploration of current research using web visualization tools: Joydeep Mukherjee, Lyndon E Llewellyn and Elizabeth A Evans-Illidge : Marine Drugs, 6, 550-577, 2008   Assessing the effect of herbicide diuron on river biofilm: A statistical model. Tanaya Bhowmick, Goutam Sen, Joydeep Mukherjee, Reshmi Das: Chemosphere, 282, 131104, 2021   Marine enzymes (Invited review article): Debashish Ghosh, Malay Saha, Barindra Sana and Joydeep Mukherjee: Advances in Biochemical Engineering and Biotechnology, 96, 189-218, 2005   Environmental microbiology and biotechnology: progress and prospects (invited review article): Joydeep Mukherjee: Chemie Ingenieur Technik 86, 12, 1-15, 2014   The current and future role of microbial culture collections in food security worldwide: Alondra María Díaz-Rodríguez, Lilian Alejandra Salcedo Gastelum, Carmen María Félix Pablos, Fannie Isela Parra-Cota, Gustavo Santoyo, Mariana Laura Puente, Dhruba Bhattacharya, Joydeep Mukherjee, Sergio de los Santos-Villalobos: Frontiers in Sustainable Food Systems 4:614739. doi: 10.3389/fsufs.2020.614739, 2021   Role of intertidal microbial communities in carbon dioxide sequestration and pollutant removal: A review: Abhishek Mandal, Ahana Dutta, Reshmi Das, Joydeep Mukherjee: Marine Pollution Bulletin 170, 112626, 2021

Publication in Conference Proceedings

    SELECTED INTERNATIONAL CONFERENCES Cyanobacteria from Indian Sundarbans as a source of antimicrobial compounds: Arnab Pramanik and Joydeep Mukherjee: Oral presentation at the International Conference on Bioscience, Biochemistry and Bioinformatics (ICBBB), 26-28th February, 2011 in Singapore    Application of halophilic archaea for the production of polyhydroxyalkanoates (bioplastics): Riddhi Mahansaria, Joydeep Mukherjee: ICBE Asia (AIChE) Conference, 8-10 January, 2018, Singapore    Identification of marine sponge pathogen and purification and characterization of virulence factor, collagenase enzyme: S. Bhattacharya, J. D. Choudhury, J. Mukherjee: American Society for Microbiology (ASM) Conference, 7-11 June, 2018, Atlanta, USA     Cyclic diketopiperazine from marine sponge associated Bacillus sp.: Structural characterization and antimicrobial activity: Dhruba Bhattacharyya and Joydeep Mukherjee: Poster presentation in Gordon Research Conferences, Ventura, United States: February 23rd to 28th, 2020    Tannic acid induced membrane surface modification to increase efficiency of direct contact membrane distillation for desalination of the bioreactor effluent of a bioplastic-producing haloarchaeal bioprocess: Arnab Banerjee, Joydeep Mukherjee: Materials Today Proceedings, 47 (7), 1404-1408, 2021    Valorization of rural abattoir waste as fertilizer for sustainable agricultural production and socio-economic development: Shantanu Bhunia, Ankita Bhowmik, Anupam Debsarkar, Rambilash Mallick, Joydeep Mukherjee: Nature Conferences, Waste Management and Valorisation for a Sustainable Future, Seoul, South Korea, October 26-28, 2021    Identification of three filamentous cyanobacteria isolated from Indian mangrove forest based on modern polyphasic taxonomic approach: Arup Ratan Roy and Joydeep Mukherjee: American Society for Microbiology (ASM) Conference, 13-17 June, 2024, Atlanta, USA

Patents

    Enhanced surface area conico-cylindrical flask (ES-CCF) for biofilm cultivation: US Patent No. US 8,945,917 B2, Date of patent: February 3rd, 2015. Inventors: Sreyashi Sarkar, Debashis Roy, Joydeep Mukherjee     An apparatus for recycling slaughterhouse waste and method thereof. Inventors: Ankita Bhowmik, Shantanu Bhunia, Joydeep Mukherjee: Indian Patent No. 370569, date of grant 29/06/2021    Device and method of providing enhanced surface area for growth and attachment of biofilms/ biological cells in a modified cylindrical flask: Atulona Datta and Joydeep Mukherjee, Indian Patent No. 402101, date of grant 27/07/2022

NBA Accreditation:UG-CSE,ETCE (6yrs) & UG-IT,IEE,PE (3yrs)